| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.721965881262] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mating projection tip | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| cell projection part | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| cell projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| mating projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| 1,3-beta-glucan synthase complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| regulation of cell size | 3.0847E-4 | 2 | 111 | 2 | 6292 |
| regulation of anatomical structure size | 3.2544E-4 | 2 | 114 | 2 | 6292 |
| regulation of cellular component size | 3.2544E-4 | 2 | 114 | 2 | 6292 |
| growth | 5.275E-4 | 2 | 145 | 2 | 6292 |
| signaling pathway | 8.5067E-4 | 2 | 184 | 2 | 6292 |
| osmosensory signaling pathway via Sho1 osmosensor | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
| osmosensory signaling pathway | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| cellular response to abiotic stimulus | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| cellular response to osmotic stress | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| regulation of biological quality | 7.6561E-3 | 2 | 551 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| molecular transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| signal transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| osmosensor activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| transmembrane receptor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| receptor activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |