| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.727193868467] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| HMT1 |
|
|
|
| RMT2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peptidyl-arginine modification | 5.0527E-8 | 2 | 2 | 2 | 6292 |
| peptidyl-amino acid modification | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| peptidyl-arginine methylation | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| ribosome biogenesis | 3.0157E-3 | 2 | 346 | 2 | 6292 |
| ribonucleoprotein complex biogenesis | 3.5243E-3 | 2 | 374 | 2 | 6292 |
| protein modification process | 6.278E-3 | 2 | 499 | 2 | 6292 |
| protein amino acid alkylation | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| protein amino acid methylation | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| macromolecule modification | 8.1649E-3 | 2 | 569 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| arginine N-methyltransferase activity | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| protein-arginine N-methyltransferase activity | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| protein methyltransferase activity | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| N-methyltransferase activity | 1.5158E-5 | 2 | 25 | 2 | 6292 |
| S-adenosylmethionine-dependent methyltransferase activity | 1.1171E-4 | 2 | 67 | 2 | 6292 |
| methyltransferase activity | 2.304E-4 | 2 | 96 | 2 | 6292 |
| transferase activity, transferring one-carbon groups | 2.4511E-4 | 2 | 99 | 2 | 6292 |