| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.820232312694] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| BUD6 |
|
|
|
| HOF1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
| cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| polarisome | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
| cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
| cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
| response to stress | 6.2277E-3 | 2 | 497 | 2 | 6292 |
| Rho protein signal transduction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| cytoskeletal regulatory protein binding | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |