From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.944683602565] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
CDC11 |
|
|
|
SHS1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
septin ring | 5.3053E-6 | 2 | 15 | 2 | 6292 |
septin cytoskeleton | 5.3053E-6 | 2 | 15 | 2 | 6292 |
cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
mating projection base | 2.224E-3 | 2 | 7 | 1 | 6292 |
cellular bud neck septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
cellular bud neck septin ring | 2.859E-3 | 2 | 9 | 1 | 6292 |
cleavage apparatus septin structure | 2.859E-3 | 2 | 9 | 1 | 6292 |
spore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
ascospore wall | 3.1764E-3 | 2 | 10 | 1 | 6292 |
prospore membrane | 6.0308E-3 | 2 | 19 | 1 | 6292 |
intracellular immature spore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
ascospore-type prospore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytokinesis | 3.1407E-4 | 2 | 112 | 2 | 6292 |
cell morphogenesis | 3.9158E-4 | 2 | 125 | 2 | 6292 |
cellular component morphogenesis | 4.7763E-4 | 2 | 138 | 2 | 6292 |
cell division | 5.275E-4 | 2 | 145 | 2 | 6292 |
anatomical structure morphogenesis | 1.6621E-3 | 2 | 257 | 2 | 6292 |
anatomical structure development | 1.7012E-3 | 2 | 260 | 2 | 6292 |
cellular developmental process | 1.9175E-3 | 2 | 276 | 2 | 6292 |
developmental process | 2.7595E-3 | 2 | 331 | 2 | 6292 |
axial cellular bud site selection | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
structural constituent of cytoskeleton | 6.9626E-5 | 2 | 53 | 2 | 6292 |
structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |
phosphatidylinositol binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |