| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.975923057948] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| Arp2/3 protein complex | 2.224E-3 | 2 | 7 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
| cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin nucleation | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| actin filament organization | 1.151E-4 | 2 | 68 | 2 | 6292 |
| actin cytoskeleton organization | 3.1973E-4 | 2 | 113 | 2 | 6292 |
| actin filament-based process | 3.4287E-4 | 2 | 117 | 2 | 6292 |
| cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
| actin polymerization or depolymerization | 2.859E-3 | 2 | 9 | 1 | 6292 |
| mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| axial cellular bud site selection | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin monomer binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |