From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.00247394526] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
eukaryotic translation initiation factor 4F complex | 3.0316E-7 | 2 | 4 | 2 | 6292 |
plasma membrane enriched fraction | 3.1786E-4 | 2 | 1 | 1 | 6292 |
ribosome | 2.1173E-3 | 2 | 290 | 2 | 6292 |
ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
translational initiation | 4.3504E-5 | 2 | 42 | 2 | 6292 |
regulation of translational initiation | 3.4937E-3 | 2 | 11 | 1 | 6292 |
translation | 3.5621E-3 | 2 | 376 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
translation initiation factor activity | 1.7735E-5 | 2 | 27 | 2 | 6292 |
translation factor activity, nucleic acid binding | 4.7798E-5 | 2 | 44 | 2 | 6292 |
ATP binding | 7.6148E-3 | 2 | 24 | 1 | 6292 |
adenyl ribonucleotide binding | 7.9314E-3 | 2 | 25 | 1 | 6292 |
ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |
adenyl nucleotide binding | 9.5139E-3 | 2 | 30 | 1 | 6292 |
purine nucleoside binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |