| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.0394578361] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FAT1 |
|
|
|
| PDR16 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microsome | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| vesicular fraction | 9.6001E-6 | 2 | 20 | 2 | 6292 |
| lipid particle | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| membrane fraction | 2.0691E-4 | 2 | 91 | 2 | 6292 |
| insoluble fraction | 2.0691E-4 | 2 | 91 | 2 | 6292 |
| cell fraction | 4.1715E-4 | 2 | 129 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid transport | 3.3651E-5 | 2 | 37 | 2 | 6292 |
| lipid localization | 3.744E-5 | 2 | 39 | 2 | 6292 |
| very long-chain fatty acid metabolic process | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| phospholipid transport | 3.811E-3 | 2 | 12 | 1 | 6292 |
| macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid transporter activity | 8.6401E-6 | 2 | 19 | 2 | 6292 |
| fatty acid transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| long-chain fatty acid transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| phosphatidylinositol transporter activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| long-chain fatty acid-CoA ligase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| fatty acid ligase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
| ligase activity, forming carbon-sulfur bonds | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |
| phospholipid transporter activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |