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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.43372371411]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
BNR1
  • cellular bud neck contractile ring
    		•
  • axial cellular bud site selection
  • response to osmotic stress
  • actin filament organization
    		•
  • cytoskeletal protein binding
    		•
    IQG1
  • cellular bud neck contractile ring
    		•
  • response to osmotic stress
  • cytokinesis
  • actin filament organization
    		•
  • cytoskeletal protein binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cellular bud neck contractile ring 7.7306E-6 2 18 2 6292
    actomyosin contractile ring 7.7306E-6 2 18 2 6292
    contractile ring 7.7306E-6 2 18 2 6292
    cell division site 1.7735E-5 2 27 2 6292
    cell division site part 1.7735E-5 2 27 2 6292
    actin cytoskeleton 1.8038E-4 2 85 2 6292
    cell cortex part 2.304E-4 2 96 2 6292
    cell cortex 2.974E-4 2 109 2 6292
    cellular bud neck 4.1715E-4 2 129 2 6292
    cellular bud 6.9196E-4 2 166 2 6292
    site of polarized growth 7.0879E-4 2 168 2 6292
    cytoskeletal part 1.0156E-3 2 201 2 6292
    cytoskeleton 1.1732E-3 2 216 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    actin filament organization 1.151E-4 2 68 2 6292
    response to osmotic stress 1.4784E-4 2 77 2 6292
    cytokinesis 3.1407E-4 2 112 2 6292
    actin cytoskeleton organization 3.1973E-4 2 113 2 6292
    actin filament-based process 3.4287E-4 2 117 2 6292
    response to abiotic stimulus 3.4287E-4 2 117 2 6292
    cell division 5.275E-4 2 145 2 6292
    cytoskeleton organization 1.3422E-3 2 231 2 6292
    response to stress 6.2277E-3 2 497 2 6292
    axial cellular bud site selection 9.1975E-3 2 29 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    cytoskeletal protein binding 8.6451E-5 2 59 2 6292
    protein binding 9.4468E-3 2 612 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle