| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.073] [SVM Score: 0.347654231336] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| RPL34B |
|
|
|
| RPS28B |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cytosolic ribosome | 2.5516E-4 | 2 | 101 | 2 | 6292 |
| cytosolic part | 3.7294E-4 | 2 | 122 | 2 | 6292 |
| ribosomal subunit | 8.4142E-4 | 2 | 183 | 2 | 6292 |
| cytosol | 2.0305E-3 | 2 | 284 | 2 | 6292 |
| ribosome | 2.1173E-3 | 2 | 290 | 2 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| anatomical structure homeostasis | 2.0592E-3 | 2 | 286 | 2 | 6292 |
| telomere organization | 2.0592E-3 | 2 | 286 | 2 | 6292 |
| telomere maintenance | 2.0592E-3 | 2 | 286 | 2 | 6292 |
| translation | 3.5621E-3 | 2 | 376 | 2 | 6292 |
| homeostatic process | 4.1951E-3 | 2 | 408 | 2 | 6292 |
| regulation of biological quality | 7.6561E-3 | 2 | 551 | 2 | 6292 |
| chromosome organization | 7.7677E-3 | 2 | 555 | 2 | 6292 |
| DNA metabolic process | 8.631E-3 | 2 | 585 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of ribosome | 1.1301E-3 | 2 | 212 | 2 | 6292 |
| structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |