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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.057] [SVM Score: 0.487016078659]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic dynein complex 1.2712E-3 2 4 1 6292
dynein complex 1.2712E-3 2 4 1 6292
cytoplasmic microtubule 4.4455E-3 2 14 1 6292
microtubule associated complex 5.7138E-3 2 18 1 6292
microtubule 9.8303E-3 2 31 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

microtubule-based movement 6.0632E-6 2 16 2 6292
microtubule-based transport 6.0632E-6 2 16 2 6292
nuclear migration along microtubule 6.0632E-6 2 16 2 6292
cytoskeleton-dependent intracellular transport 7.7306E-6 2 18 2 6292
nuclear migration 9.6001E-6 2 20 2 6292
nucleus localization 9.6001E-6 2 20 2 6292
establishment of nucleus localization 9.6001E-6 2 20 2 6292
establishment of organelle localization 7.5032E-5 2 55 2 6292
organelle localization 1.8038E-4 2 85 2 6292
microtubule cytoskeleton organization 2.3525E-4 2 97 2 6292
microtubule-based process 3.0847E-4 2 111 2 6292
organelle fission 3.1973E-4 2 113 2 6292
cellular component morphogenesis 4.7763E-4 2 138 2 6292
cytoskeleton organization 1.3422E-3 2 231 2 6292
anatomical structure morphogenesis 1.6621E-3 2 257 2 6292
anatomical structure development 1.7012E-3 2 260 2 6292
mitochondrial fission 1.9064E-3 2 6 1 6292
cellular developmental process 1.9175E-3 2 276 2 6292
developmental process 2.7595E-3 2 331 2 6292
establishment of spindle localization 3.1764E-3 2 10 1 6292
establishment of spindle orientation 3.1764E-3 2 10 1 6292
establishment of mitotic spindle localization 3.1764E-3 2 10 1 6292
spindle localization 3.1764E-3 2 10 1 6292
establishment of mitotic spindle orientation 3.1764E-3 2 10 1 6292
cell part morphogenesis 3.811E-3 2 12 1 6292
mitochondrion morphogenesis 3.811E-3 2 12 1 6292
mitotic spindle elongation 6.6645E-3 2 21 1 6292
spindle elongation 6.6645E-3 2 21 1 6292
intracellular transport 7.7118E-3 2 553 2 6292
establishment of localization in cell 9.0494E-3 2 599 2 6292
mitochondrion inheritance 9.1975E-3 2 29 1 6292
mitochondrion distribution 9.1975E-3 2 29 1 6292
mitochondrion localization 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

motor activity 5.7138E-3 2 18 1 6292
tubulin binding 6.3477E-3 2 20 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle