From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.057] [SVM Score: 0.781766528856] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
NPL3 |
|
|
|
SBP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
negative regulation of translation in response to stress | 3.1786E-4 | 2 | 1 | 1 | 6292 |
regulation of translation in response to stress | 3.1786E-4 | 2 | 1 | 1 | 6292 |
negative regulation of translation | 2.224E-3 | 2 | 7 | 1 | 6292 |
negative regulation of cellular protein metabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
negative regulation of protein metabolic process | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
poly-purine tract binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
poly(A) RNA binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
single-stranded RNA binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
RNA binding | 3.3934E-3 | 2 | 367 | 2 | 6292 |
snoRNA binding | 9.8303E-3 | 2 | 31 | 1 | 6292 |