| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.998899527116] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| TRS20 |
|
|
|
| TRS31 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| TRAPP complex | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| cis-Golgi network | 3.9411E-6 | 2 | 13 | 2 | 6292 |
| Golgi apparatus part | 3.5475E-4 | 2 | 119 | 2 | 6292 |
| Golgi apparatus | 7.3441E-4 | 2 | 171 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ER to Golgi vesicle-mediated transport | 1.7194E-4 | 2 | 83 | 2 | 6292 |
| Golgi vesicle transport | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| vesicle-mediated transport | 2.9119E-3 | 2 | 340 | 2 | 6292 |
| intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
| establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Ras guanyl-nucleotide exchange factor activity | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| guanyl-nucleotide exchange factor activity | 3.552E-5 | 2 | 38 | 2 | 6292 |
| small GTPase regulator activity | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| GTPase regulator activity | 1.7614E-4 | 2 | 84 | 2 | 6292 |
| nucleoside-triphosphatase regulator activity | 2.256E-4 | 2 | 95 | 2 | 6292 |
| enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |