YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

signalosome 2.5595E-16 5 7 5 6292
nuclear part 1.6432E-4 5 1103 5 6292
protein complex 1.913E-4 5 1137 5 6292
macromolecular complex 1.1794E-3 5 1635 5 6292
nucleus 3.5796E-3 5 2041 5 6292
organelle part 6.2578E-3 5 2282 5 6292
intracellular organelle part 6.2578E-3 5 2282 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein deneddylation 7.3127E-17 5 6 5 6292
protein modification by small protein removal 1.4474E-12 5 29 5 6292
adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion 7.6616E-11 5 14 4 6292
adaptation of signaling pathway 7.6616E-11 5 14 4 6292
regulation of signaling pathway 1.5644E-9 5 28 4 6292
protein modification by small protein conjugation or removal 1.7892E-9 5 114 5 6292
response to pheromone involved in conjugation with cellular fusion 9.7423E-8 5 76 4 6292
response to pheromone 2.6239E-7 5 97 4 6292
cellular response to chemical stimulus 3.9031E-7 5 107 4 6292
post-translational protein modification 5.7263E-7 5 357 5 6292
conjugation with cellular fusion 7.3129E-7 5 125 4 6292
conjugation 7.5517E-7 5 126 4 6292
response to organic substance 1.0581E-6 5 137 4 6292
multi-organism process 1.2573E-6 5 143 4 6292
protein modification process 3.0798E-6 5 499 5 6292
signaling pathway 3.4609E-6 5 184 4 6292
macromolecule modification 5.9519E-6 5 569 5 6292
sexual reproduction 8.9037E-6 5 233 4 6292
signaling 1.2176E-5 5 252 4 6292
reproduction 3.4791E-5 5 328 4 6292
cellular response to stimulus 6.1753E-5 5 379 4 6292
response to chemical stimulus 6.3714E-5 5 382 4 6292
cellular protein metabolic process 1.4379E-4 5 1074 5 6292
protein metabolic process 1.9046E-4 5 1136 5 6292
response to stimulus 9.8503E-4 5 766 4 6292
regulation of biological process 1.3089E-3 5 824 4 6292
biological regulation 5.8209E-3 5 1213 4 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

metalloendopeptidase activity 8.7135E-3 5 11 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle