| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 3 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CLP1 |
|
|
|
| RNA14 |
|
|
|
| RNA15 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA cleavage factor complex | 2.7472E-8 | 3 | 20 | 3 | 6292 |
| nucleoplasm part | 5.8345E-5 | 3 | 245 | 3 | 6292 |
| nucleoplasm | 7.3064E-5 | 3 | 264 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mRNA polyadenylation | 2.3352E-8 | 3 | 19 | 3 | 6292 |
| mRNA cleavage | 5.5427E-8 | 3 | 25 | 3 | 6292 |
| RNA polyadenylation | 6.2656E-8 | 3 | 26 | 3 | 6292 |
| mRNA 3'-end processing | 1.0832E-7 | 3 | 31 | 3 | 6292 |
| RNA 3'-end processing | 2.7665E-7 | 3 | 42 | 3 | 6292 |
| nucleic acid phosphodiester bond hydrolysis | 3.6582E-7 | 3 | 46 | 3 | 6292 |
| mRNA processing | 1.4956E-5 | 3 | 156 | 3 | 6292 |
| mRNA metabolic process | 3.8268E-5 | 3 | 213 | 3 | 6292 |
| RNA processing | 2.1865E-4 | 3 | 380 | 3 | 6292 |
| RNA metabolic process | 3.4763E-3 | 3 | 954 | 3 | 6292 |
| gene expression | 8.4626E-3 | 3 | 1283 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein heterodimerization activity | 9.0929E-7 | 3 | 4 | 2 | 6292 |
| protein dimerization activity | 2.2727E-6 | 3 | 6 | 2 | 6292 |
| RNA binding | 1.9692E-4 | 3 | 367 | 3 | 6292 |
| nucleic acid binding | 1.1811E-3 | 3 | 666 | 3 | 6292 |
| binding | 8.6823E-3 | 3 | 1294 | 3 | 6292 |