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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin cytoskeleton 2.3802E-6 3 85 3 6292
Arp2/3 protein complex 3.1815E-6 3 7 2 6292
cytoskeletal part 3.2131E-5 3 201 3 6292
cytoskeleton 3.9916E-5 3 216 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin filament organization 1.2077E-6 3 68 3 6292
actin cytoskeleton organization 5.6424E-6 3 113 3 6292
actin filament-based process 6.2688E-6 3 117 3 6292
cytoskeleton organization 4.8867E-5 3 231 3 6292
mitochondrion inheritance 6.1366E-5 3 29 2 6292
mitochondrion distribution 6.1366E-5 3 29 2 6292
mitochondrion localization 6.5742E-5 3 30 2 6292
organelle inheritance 1.4276E-4 3 44 2 6292
sequestering of actin monomers 4.768E-4 3 1 1 6292
organelle localization 5.3638E-4 3 85 2 6292
regulation of actin polymerization or depolymerization 1.4299E-3 3 3 1 6292
protein polymerization 1.4299E-3 3 3 1 6292
regulation of actin cytoskeleton organization 1.4299E-3 3 3 1 6292
regulation of protein polymerization 1.4299E-3 3 3 1 6292
negative regulation of protein polymerization 1.4299E-3 3 3 1 6292
negative regulation of protein complex assembly 1.4299E-3 3 3 1 6292
actin filament polymerization 1.4299E-3 3 3 1 6292
regulation of actin filament polymerization 1.4299E-3 3 3 1 6292
regulation of actin filament length 1.4299E-3 3 3 1 6292
negative regulation of actin filament polymerization 1.4299E-3 3 3 1 6292
regulation of actin filament-based process 1.4299E-3 3 3 1 6292
mitochondrion organization 1.8027E-3 3 156 2 6292
negative regulation of cytoskeleton organization 3.8101E-3 3 8 1 6292
actin polymerization or depolymerization 4.2857E-3 3 9 1 6292
localization 4.7701E-3 3 1060 3 6292
regulation of protein complex assembly 5.2364E-3 3 11 1 6292
organelle organization 5.734E-3 3 1127 3 6292
regulation of cellular component biogenesis 8.5592E-3 3 18 1 6292
regulation of cytoskeleton organization 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin binding 3.2051E-8 3 21 3 6292
cytoskeletal protein binding 7.8342E-7 3 59 3 6292
ATP binding 4.1739E-5 3 24 2 6292
adenyl ribonucleotide binding 4.5363E-5 3 25 2 6292
adenyl nucleotide binding 6.5742E-5 3 30 2 6292
purine nucleoside binding 7.0268E-5 3 31 2 6292
nucleoside binding 7.4945E-5 3 32 2 6292
ribonucleotide binding 1.2378E-4 3 41 2 6292
purine ribonucleotide binding 1.2378E-4 3 41 2 6292
purine nucleotide binding 1.9993E-4 3 52 2 6292
structural constituent of cytoskeleton 2.0775E-4 3 53 2 6292
nucleotide binding 2.5779E-4 3 59 2 6292
protein binding 9.1614E-4 3 612 3 6292
actin monomer binding 9.5344E-4 3 2 1 6292
structural molecule activity 8.374E-3 3 339 2 6292
binding 8.6823E-3 3 1294 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle