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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic exosome (RNase complex) 5.7116E-3 3 12 1 6292
nuclear exosome (RNase complex) 7.136E-3 3 15 1 6292
exosome (RNase complex) 7.6106E-3 3 16 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA catabolic process 1.2626E-6 3 69 3 6292
RNA catabolic process 1.9799E-6 3 80 3 6292
response to exogenous dsRNA 3.1815E-6 3 7 2 6292
response to dsRNA 3.1815E-6 3 7 2 6292
mRNA metabolic process 3.8268E-5 3 213 3 6292
cellular macromolecule catabolic process 7.39E-5 3 265 3 6292
macromolecule catabolic process 1.0103E-4 3 294 3 6292
cellular catabolic process 2.85E-4 3 415 3 6292
catabolic process 4.8714E-4 3 496 3 6292
response to organic substance 1.3919E-3 3 137 2 6292
RNA metabolic process 3.4763E-3 3 954 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation repressor activity 4.5469E-7 3 3 2 6292
translation regulator activity 8.329E-6 3 11 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle