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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic ribosome 5.2025E-8 8 101 5 6292
cytosolic part 1.35E-7 8 122 5 6292
cytosolic large ribosomal subunit 5.0845E-7 8 60 4 6292
ribosomal subunit 1.0284E-6 8 183 5 6292
large ribosomal subunit 5.867E-6 8 110 4 6292
cytosol 9.0595E-6 8 284 5 6292
ribosome 1.004E-5 8 290 5 6292
non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
ribonucleoprotein complex 1.6235E-4 8 514 5 6292
mitochondrial chromosome 2.5415E-3 8 2 1 6292
cytoplasmic chromosome 2.5415E-3 8 2 1 6292
organelle part 4.4856E-3 8 2282 7 6292
intracellular organelle part 4.4856E-3 8 2282 7 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.1072E-6 8 376 6 6292
cellular protein metabolic process 4.9998E-4 8 1074 6 6292
protein metabolic process 6.8696E-4 8 1136 6 6292
cellular macromolecule biosynthetic process 8.7999E-4 8 1187 6 6292
macromolecule biosynthetic process 8.8836E-4 8 1189 6 6292
gene expression 1.3613E-3 8 1283 6 6292
cellular biosynthetic process 4.1159E-3 8 1567 6 6292
biosynthetic process 4.6438E-3 8 1602 6 6292
organelle localization 4.7905E-3 8 85 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.6119E-8 8 212 6 6292
structural molecule activity 5.984E-7 8 339 6 6292
rRNA binding 1.6826E-4 8 16 2 6292
nucleic acid binding 6.1432E-3 8 666 4 6292
RNA binding 8.8446E-3 8 367 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle