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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 2.6665E-4 3 60 2 6292
cytosolic ribosome 7.5745E-4 3 101 2 6292
large ribosomal subunit 8.9832E-4 3 110 2 6292
cytosolic part 1.1046E-3 3 122 2 6292
ribosomal subunit 2.4758E-3 3 183 2 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
cytosol 5.9093E-3 3 284 2 6292
ribosome 6.1581E-3 3 290 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 2.4051E-4 3 57 2 6292
posttranscriptional regulation of gene expression 2.7566E-4 3 61 2 6292
regulation of cellular protein metabolic process 3.4288E-4 3 68 2 6292
regulation of protein metabolic process 4.0629E-4 3 74 2 6292
processing of 27S pre-rRNA 7.6106E-3 3 16 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA binding 1.8163E-5 3 16 2 6292
RNA binding 1.9692E-4 3 367 3 6292
nucleic acid binding 1.1811E-3 3 666 3 6292
structural constituent of ribosome 3.3148E-3 3 212 2 6292
structural molecule activity 8.374E-3 3 339 2 6292
binding 8.6823E-3 3 1294 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle