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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 5.8232E-13 6 60 6 6292
cytosolic ribosome 1.4741E-11 6 101 6 6292
large ribosomal subunit 2.4913E-11 6 110 6 6292
cytosolic part 4.7016E-11 6 122 6 6292
ribosomal subunit 5.5853E-10 6 183 6 6292
cytosol 8.0376E-9 6 284 6 6292
ribosome 9.1219E-9 6 290 6 6292
ribonucleoprotein complex 2.8931E-7 6 514 6 6292
intracellular non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
non-membrane-bounded organelle 1.2371E-5 6 959 6 6292
macromolecular complex 3.0579E-4 6 1635 6 6292
organelle part 2.2664E-3 6 2282 6 6292
intracellular organelle part 2.2664E-3 6 2282 6 6292
cytoplasmic part 3.7539E-3 6 2482 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 4.3855E-8 6 376 6 6292
cellular protein metabolic process 2.4449E-5 6 1074 6 6292
protein metabolic process 3.4263E-5 6 1136 6 6292
cellular macromolecule biosynthetic process 4.4618E-5 6 1187 6 6292
macromolecule biosynthetic process 4.5072E-5 6 1189 6 6292
gene expression 7.1216E-5 6 1283 6 6292
cellular biosynthetic process 2.3689E-4 6 1567 6 6292
biosynthetic process 2.7052E-4 6 1602 6 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.3656E-9 6 212 6 6292
structural molecule activity 2.3452E-8 6 339 6 6292
RNA binding 1.5555E-4 6 367 4 6292
nucleic acid binding 1.5669E-3 6 666 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle