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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.085] [SVM Score: 0.459487926099]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lipid particle 3.0063E-5 2 35 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

neutral lipid catabolic process 6.3568E-4 2 2 1 6292
acylglycerol catabolic process 6.3568E-4 2 2 1 6292
glycerol ether catabolic process 6.3568E-4 2 2 1 6292
triglyceride catabolic process 6.3568E-4 2 2 1 6292
lipid metabolic process 1.4491E-3 2 240 2 6292
organic ether metabolic process 1.5888E-3 2 5 1 6292
glycerol ether metabolic process 1.5888E-3 2 5 1 6292
triglyceride metabolic process 1.5888E-3 2 5 1 6292
neutral lipid metabolic process 1.5888E-3 2 5 1 6292
acylglycerol metabolic process 1.5888E-3 2 5 1 6292
glycerolipid catabolic process 1.5888E-3 2 5 1 6292
cellular lipid catabolic process 5.3968E-3 2 17 1 6292
lipid catabolic process 5.3968E-3 2 17 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lipase activity 1.0611E-5 2 21 2 6292
carboxylesterase activity 1.1672E-5 2 22 2 6292
sterol esterase activity 9.5344E-4 2 3 1 6292
triglyceride lipase activity 1.2712E-3 2 4 1 6292
hydrolase activity, acting on ester bonds 2.929E-3 2 341 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle