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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.464860945521]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
DIA4
  • cytoplasm
  • mitochondrion
    		•
  • pseudohyphal growth
  • invasive growth in response to glucose limitation
  • aerobic respiration
  • seryl-tRNA aminoacylation
    		•
  • serine-tRNA ligase activity
    		•
    MST1
  • mitochondrion
    		•
  • threonyl-tRNA aminoacylation
    		•
  • threonine-tRNA ligase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    tRNA aminoacylation 2.6678E-5 2 33 2 6292
    amino acid activation 2.6678E-5 2 33 2 6292
    tRNA aminoacylation for protein translation 2.6678E-5 2 33 2 6292
    threonyl-tRNA aminoacylation 3.1786E-4 2 1 1 6292
    tRNA metabolic process 3.6076E-4 2 120 2 6292
    seryl-tRNA aminoacylation 6.3568E-4 2 2 1 6292
    cellular amino acid metabolic process 9.9543E-4 2 199 2 6292
    cellular amine metabolic process 1.2395E-3 2 222 2 6292
    amine metabolic process 1.4856E-3 2 243 2 6292
    cellular amino acid and derivative metabolic process 1.4856E-3 2 243 2 6292
    ncRNA metabolic process 1.6621E-3 2 257 2 6292
    organic acid metabolic process 2.793E-3 2 333 2 6292
    oxoacid metabolic process 2.793E-3 2 333 2 6292
    carboxylic acid metabolic process 2.793E-3 2 333 2 6292
    cellular ketone metabolic process 3.0157E-3 2 346 2 6292
    translation 3.5621E-3 2 376 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    ligase activity, forming aminoacyl-tRNA and related compounds 3.552E-5 2 38 2 6292
    aminoacyl-tRNA ligase activity 3.552E-5 2 38 2 6292
    ligase activity, forming carbon-oxygen bonds 3.552E-5 2 38 2 6292
    ligase activity 5.6464E-4 2 150 2 6292
    threonine-tRNA ligase activity 6.3568E-4 2 2 1 6292
    serine-tRNA ligase activity 6.3568E-4 2 2 1 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle