| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.512438172984] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| RCE1 |
|
|
|
| STE14 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum membrane | 4.4352E-4 | 2 | 133 | 2 | 6292 |
| endoplasmic reticulum part | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| subsynaptic reticulum | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 1.3539E-3 | 2 | 232 | 2 | 6292 |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
| endomembrane system | 3.9918E-3 | 2 | 398 | 2 | 6292 |
| integral to endoplasmic reticulum membrane | 9.8303E-3 | 2 | 31 | 1 | 6292 |
| intrinsic to endoplasmic reticulum membrane | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peptide pheromone maturation | 1.819E-6 | 2 | 9 | 2 | 6292 |
| protein maturation | 3.9411E-5 | 2 | 40 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein-S-isoprenylcysteine O-methyltransferase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| prenyl-dependent CAAX protease activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| C-terminal protein carboxyl methyltransferase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| O-methyltransferase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| protein methyltransferase activity | 6.3477E-3 | 2 | 20 | 1 | 6292 |