| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.515940837955] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FLC1 |
|
|
|
| FLC2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| FAD transport | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| nucleotide transport | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| cofactor transport | 3.3348E-6 | 2 | 12 | 2 | 6292 |
| fungal-type cell wall biogenesis | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| protein folding | 1.5173E-4 | 2 | 78 | 2 | 6292 |
| cell wall biogenesis | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid transport | 2.304E-4 | 2 | 96 | 2 | 6292 |
| cellular cell wall organization or biogenesis | 1.0877E-3 | 2 | 208 | 2 | 6292 |
| cell wall organization or biogenesis | 1.0877E-3 | 2 | 208 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| FAD transmembrane transporter activity | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| cofactor transporter activity | 3.9411E-6 | 2 | 13 | 2 | 6292 |
| substrate-specific transmembrane transporter activity | 1.7943E-3 | 2 | 267 | 2 | 6292 |
| transmembrane transporter activity | 2.3578E-3 | 2 | 306 | 2 | 6292 |
| substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
| transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |