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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.52690345993]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

septin ring 5.3053E-6 2 15 2 6292
septin cytoskeleton 5.3053E-6 2 15 2 6292
cell cortex part 2.304E-4 2 96 2 6292
cell cortex 2.974E-4 2 109 2 6292
cellular bud neck 4.1715E-4 2 129 2 6292
cellular bud 6.9196E-4 2 166 2 6292
site of polarized growth 7.0879E-4 2 168 2 6292
cytoskeletal part 1.0156E-3 2 201 2 6292
cytoskeleton 1.1732E-3 2 216 2 6292
cellular bud neck septin structure 2.859E-3 2 9 1 6292
cellular bud neck septin ring 2.859E-3 2 9 1 6292
cleavage apparatus septin structure 2.859E-3 2 9 1 6292
cell division site 8.5646E-3 2 27 1 6292
cell division site part 8.5646E-3 2 27 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytokinesis 3.1407E-4 2 112 2 6292
asymmetric protein localization 3.1786E-4 2 1 1 6292
cell division 5.275E-4 2 145 2 6292
barrier septum formation 9.5344E-4 2 3 1 6292
septin cytoskeleton organization 2.224E-3 2 7 1 6292
septin ring assembly 2.224E-3 2 7 1 6292
septin ring organization 2.224E-3 2 7 1 6292
aminoglycan biosynthetic process 3.4937E-3 2 11 1 6292
chitin biosynthetic process 3.4937E-3 2 11 1 6292
cellular component assembly 3.7349E-3 2 385 2 6292
aminoglycan metabolic process 4.1283E-3 2 13 1 6292
chitin metabolic process 4.1283E-3 2 13 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle