| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.582221580593] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| YJR096W |
|
|
|
| YPR1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| D-xylose metabolic process | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| D-xylose catabolic process | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| arabinose metabolic process | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| arabinose catabolic process | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| pentose catabolic process | 5.0527E-7 | 2 | 5 | 2 | 6292 |
| pentose metabolic process | 3.9411E-6 | 2 | 13 | 2 | 6292 |
| monosaccharide catabolic process | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| alcohol catabolic process | 8.0641E-5 | 2 | 57 | 2 | 6292 |
| cellular carbohydrate catabolic process | 1.2915E-4 | 2 | 72 | 2 | 6292 |
| carbohydrate catabolic process | 1.4021E-4 | 2 | 75 | 2 | 6292 |
| small molecule catabolic process | 3.9158E-4 | 2 | 125 | 2 | 6292 |
| monosaccharide metabolic process | 4.5701E-4 | 2 | 135 | 2 | 6292 |
| alcohol metabolic process | 1.2172E-3 | 2 | 220 | 2 | 6292 |
| cellular carbohydrate metabolic process | 1.7276E-3 | 2 | 262 | 2 | 6292 |
| carbohydrate metabolic process | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| catabolic process | 6.2027E-3 | 2 | 496 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| aldehyde reductase activity | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| aldo-keto reductase activity | 1.819E-6 | 2 | 9 | 2 | 6292 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.3278E-4 | 2 | 73 | 2 | 6292 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.6371E-4 | 2 | 81 | 2 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |