| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.582395588029] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| periplasmic space | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| cell wall-bounded periplasmic space | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| cell wall | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| external encapsulating structure | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| extracellular region | 6.6645E-3 | 2 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| asparaginase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| acid phosphatase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| nucleoside-triphosphate diphosphatase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |