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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.609344604246]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
GPI13
  • endoplasmic reticulum
    		•
  • GPI anchor biosynthetic process
    		•
  • mannose-ethanolamine phosphotransferase activity
  • transferase activity, transferring phosphorus-containing groups
    		•
    PIS1
  • mitochondrion
  • microsome
  • endoplasmic reticulum
  • mitochondrial outer membrane
    		•
  • phosphatidylinositol biosynthetic process
  • cell cycle
    		•
  • CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    endoplasmic reticulum 3.3381E-3 2 364 2 6292
    microsome 6.3477E-3 2 20 1 6292
    vesicular fraction 6.3477E-3 2 20 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    phosphoinositide biosynthetic process 2.0514E-5 2 29 2 6292
    phosphoinositide metabolic process 4.7798E-5 2 44 2 6292
    glycerophospholipid biosynthetic process 5.0022E-5 2 45 2 6292
    glycerolipid biosynthetic process 5.4619E-5 2 47 2 6292
    phospholipid biosynthetic process 9.5546E-5 2 62 2 6292
    glycerophospholipid metabolic process 1.051E-4 2 65 2 6292
    glycerolipid metabolic process 1.2202E-4 2 70 2 6292
    phospholipid metabolic process 2.304E-4 2 96 2 6292
    organophosphate metabolic process 2.3525E-4 2 97 2 6292
    phosphatidylinositol biosynthetic process 3.1786E-4 2 1 1 6292
    lipid biosynthetic process 4.2367E-4 2 130 2 6292
    phosphatidylinositol metabolic process 6.3568E-4 2 2 1 6292
    cellular lipid metabolic process 8.5067E-4 2 184 2 6292
    lipid metabolic process 1.4491E-3 2 240 2 6292
    GPI anchor biosynthetic process 8.8811E-3 2 28 1 6292
    GPI anchor metabolic process 9.1975E-3 2 29 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    phosphotransferase activity, for other substituted phosphate groups 8.6401E-6 2 19 2 6292
    CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity 3.1786E-4 2 1 1 6292
    mannose-ethanolamine phosphotransferase activity 1.2712E-3 2 4 1 6292
    CDP-alcohol phosphatidyltransferase activity 2.859E-3 2 9 1 6292
    transferase activity, transferring phosphorus-containing groups 4.4459E-3 2 420 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle