| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.614318904037] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mating projection tip | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| cell projection part | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| incipient cellular bud site | 5.0022E-5 | 2 | 45 | 2 | 6292 |
| cell projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| mating projection | 5.9419E-5 | 2 | 49 | 2 | 6292 |
| cellular bud tip | 8.0641E-5 | 2 | 57 | 2 | 6292 |
| cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| myosin V complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| unconventional myosin complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| filamentous actin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| myosin complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| actin filament | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| calmodulin binding | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| microfilament motor activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| phosphatidylinositol-3-phosphate binding | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |