From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.642676822895] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
spindle microtubule | 5.3968E-3 | 2 | 17 | 1 | 6292 |
microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule cytoskeleton organization | 2.3525E-4 | 2 | 97 | 2 | 6292 |
microtubule-based process | 3.0847E-4 | 2 | 111 | 2 | 6292 |
cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
mitochondrial fission | 1.9064E-3 | 2 | 6 | 1 | 6292 |
cell part morphogenesis | 3.811E-3 | 2 | 12 | 1 | 6292 |
mitochondrion morphogenesis | 3.811E-3 | 2 | 12 | 1 | 6292 |
microtubule-based movement | 5.0798E-3 | 2 | 16 | 1 | 6292 |
microtubule-based transport | 5.0798E-3 | 2 | 16 | 1 | 6292 |
nuclear migration along microtubule | 5.0798E-3 | 2 | 16 | 1 | 6292 |
cytoskeleton-dependent intracellular transport | 5.7138E-3 | 2 | 18 | 1 | 6292 |
nuclear migration | 6.3477E-3 | 2 | 20 | 1 | 6292 |
nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
establishment of nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
microtubule nucleation | 7.2981E-3 | 2 | 23 | 1 | 6292 |
mitotic spindle organization in nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
tubulin binding | 9.6001E-6 | 2 | 20 | 2 | 6292 |
cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
microtubule binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |