| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.651737117587] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ERG7 |
|
|
|
| YEH1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid particle | 3.0063E-5 | 2 | 35 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| sterol metabolic process | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| steroid metabolic process | 4.5626E-5 | 2 | 43 | 2 | 6292 |
| alcohol metabolic process | 1.2172E-3 | 2 | 220 | 2 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| phytosteroid metabolic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| phytosteroid biosynthetic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ergosterol biosynthetic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
| ergosterol metabolic process | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| oxidosqualene cyclase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| lanosterol synthase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| sterol esterase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| intramolecular transferase activity | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| carboxylesterase activity | 6.9813E-3 | 2 | 22 | 1 | 6292 |