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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.654170036349]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
COQ3
  • mitochondrion
  • extrinsic to membrane
  • mitochondrial inner membrane
    		•
  • ubiquinone biosynthetic process
    		•
  • hexaprenyldihydroxybenzoate methyltransferase activity
    		•
    COQ5
  • mitochondrial matrix
  • mitochondrion
    		•
  • aerobic respiration
  • ubiquinone biosynthetic process
    		•
  • 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    mitochondrial part 5.6881E-3 2 475 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    quinone cofactor metabolic process 2.779E-6 2 11 2 6292
    ubiquinone metabolic process 2.779E-6 2 11 2 6292
    ubiquinone biosynthetic process 2.779E-6 2 11 2 6292
    quinone cofactor biosynthetic process 2.779E-6 2 11 2 6292
    coenzyme biosynthetic process 7.5032E-5 2 55 2 6292
    oxidoreduction coenzyme metabolic process 8.6451E-5 2 59 2 6292
    cofactor biosynthetic process 1.5966E-4 2 80 2 6292
    coenzyme metabolic process 3.6076E-4 2 120 2 6292
    cofactor metabolic process 5.9526E-4 2 154 2 6292
    cellular ketone metabolic process 3.0157E-3 2 346 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    methyltransferase activity 2.304E-4 2 96 2 6292
    transferase activity, transferring one-carbon groups 2.4511E-4 2 99 2 6292
    quinone cofactor methyltransferase activity 3.1786E-4 2 1 1 6292
    2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity 3.1786E-4 2 1 1 6292
    2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity 3.1786E-4 2 1 1 6292
    hexaprenyldihydroxybenzoate methyltransferase activity 6.3568E-4 2 2 1 6292
    polyprenyldihydroxybenzoate methyltransferase activity 6.3568E-4 2 2 1 6292
    C-methyltransferase activity 9.5344E-4 2 3 1 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle