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Protein Overview: YJGH_ECOLI

General Information:
Name(s) found: YJGH_ECOLI [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • UPF0076 protein yjgH - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVERTAVFPA GRHSLYAEHR YSAAIRSGDL LFVSGQVGSR EDGTPEPDFQ QQVRLAFDNL  60
   61 HATLAAAGCT FDDIIDVTSF HTDPENQFED IMTVKNEIFS APPYPNWTAV GVTWLAGFDF 120
  121 EIKVIARIPE Q

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. YJGH_ECOLI gi|134105085, gi... gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 35.522879 Structural Genomics, Protein YJGH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonuclease activity
    		•  4.29353503464865 bayes_pls_golite062009
  • endoribonuclease activity
    		•  4.17186603647388 bayes_pls_golite062009
  • endonuclease activity
    		•  2.73014048699132 bayes_pls_golite062009
  • hydrolase activity
    		•  1.75421998035125 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.58897589345701 bayes_pls_golite062009
  • catalytic activity
    		•  1.37892559560737 bayes_pls_golite062009
  • nuclease activity
    		•  1.12082233513116 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle