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Protein Overview: MDTP_ECOLI, YJCP...

General Information:
Name(s) found: YJCP_ECOLI [Swiss-Prot]
MDTP_ECOLI [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • (P32714) Hypothetical outer-membrane lipoprotein yjcP precursor [Swiss-Prot]
  • Multidrug resistance outer membrane protein mdtP precursor - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINRQLSRLL LCSILGSTTL ISGCALVRKD SAPHQQLKPE QIKLADDIHL ASSGWPQAQW  60
   61 WKQLNDPQLD ALIQRTLSGS HTLAEAKLRE EKAQSQADLL DAGSQLQVAA LGMLNRQRVS 120
  121 ANGFLSPYSM DAPALGMDGP YYTEATVGLF AGLDLDLWGV HRSAVAAAIG AHNAALAETA 180
  181 AVELSLATGV AQLYYSMQAS YQMLDLLEQT HDVIDYAVKA HQSKVAHGLE AQVPFHGARA 240
  241 QILAVDKQIV AVKGQITETR ESLRALIGAG ASDMPEIRPV ALPQVQTGIP ATLSYELLAR 300
  301 RPDLQAMRWY VQASLDQVDS ARALFYPSFD IKAFFGLDSI HLHTLFKKTS RQFNFIPGLK 360
  361 LPLFDGGRLN ANLEGTRAAS NMMIERYNQS VLNAVRDVAV NGTRLQTLND EREMQAERVE 420
  421 ATRFTQRAAE AAYQRGLTSR LQATEARLPV LAEEMSLLML DSRRVIQSIQ LMKSLGGGYQ 480
  481 AGPVVEKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 81.0 Crystal structure of the drug-discharge outer membrane protein, OprM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • drug transmembrane transporter activity
    		•  4.81710579303325 bayes_pls_golite062009
    		• 4.35844117790122 bayes_pls_golite062009
    		• 4.29225678658868 bayes_pls_golite062009
  • transporter activity
    		•  4.2806100513341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.91628575119399 bayes_pls_golite062009
  • porin activity
    		•  0.960340223825989 bayes_pls_golite062009
  • binding
    		•  0.666039242029224 bayes_pls_golite062009
  • channel activity
    		•  0.517545908208242 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.517545908208242 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  0.381147202210091 bayes_pls_golite062009
  • protein binding
    		•  0.0827883348198969 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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