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Protein Overview: gi|45552108, gi|...

General Information:
Name(s) found: gi|45552108 [NCBI NR]
gi|45446451 [NCBI NR]
gi|27923879 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|45552108|ref|NP_788635.2| Cad86C [Drosophila melanogaster] [NCBI NR]
  • gi|45446451|gb|AAF54562.4| Cad86C [Drosophila melanogaster] [NCBI NR]
  • gi|27923879|sp|Q9VGW1.2|CAD86_DROME RecName: Full=Cadherin-86C; Flags: Precursor [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1483 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    subapical complex [IDA]
    integral to membrane [NAS]
    Biological Process: regulation of cell shape [IMP]
    calcium-dependent cell-cell adhesion [ISS][NAS]
    homophilic cell adhesion [IEA]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLISGSRLFS SSAPPLRLSR SYVSRVDENA PHGTALTFVD PYVPRVYDDD TGKNGVFSLT  60
   61 LLNNNGTFEI SPNVAERSAG FLIRVRDNSM LDYEQQQSVQ FQILAQELGP ATNLSALVNV 120
  121 TVYINDVNDN APVFEQPAYS VELPENMTAG TKVVQVLATD PDSGLGGKVR YTAILGYLNT 180
  181 SLNLDAETGL ITVSTNKHGF DREVMPEYHL YVEARDMDGE GNRAQVPLII KLIDVNDETP 240
  241 IFDKDLYEFI LTHDLMGFTT TAVIHAEDKD ATAPNNEVRY EIINGNYDNQ FVLDKVTGEL 300
  301 TVREKIHLRS KKNAKTRRRR QAGSDDEDTD IFILTARAYD LGVPVRFSTT TIRVYPPESR 360
  361 KRSVKFVVPG HNPDKAKTEE TLSALSGGKV YIHNIRPLSP DEPGAKDIPA GNPGIKERSV 420
  421 VTATVIYDSS SVVDISEIQQ RLSHHNNSYA IMPQDTSSTD TLTPLQTQYK AENKVLFWLL 480
  481 ILLATLVALT ILILLLCCIC SWCPLYGAAT KRIVNISRTE DDVHLVHREM ANGKQTKSVQ 540
  541 VAEWMGRRDA WSAEKPPDTR TKPTRWEFHD GREQLDEDVG RGQDIGEGDR RHIQSAEEQQ 600
  601 RRVRIKHNRT AKDDLHLNFH NSRTNLINDR DVYMEDVIEN RDLAGDREHI TRTRVNRQEY 660
  661 ARRKQYDSEV RHIDDDSMRR HEIDRGSDID FNTAHNSLKS KRELFIKDGN VEILQLMTRD 720
  721 KTRDGLNLDD DNIYVNVPLK PAGNLSHPQL LMVDNTGKEI LMRRFIEEQP DGKQIIREHY 780
  781 QIVPGATYIQ SMPNEVQQGS TLKGDTFPLG KSGPNSIVYS QLEPEVKVIH TQPVQAGEGV 840
  841 SLDQQMQPAV SNQSLTHELE HSLKQQNALL RQILMEKEKL ENAYTQHEVA LETQSLPGQS 900
  901 MAIGTQTDCD AGTQTEGFDG VLDPEISLAK PSRRRARSEN DESMSEDGYE YVRFNPPNSP 960
  961 EGVYWIKRRR TKKRPRQPRK RIVMVEEVKR KIRTPIKEEE EVQERKKRVP PKKPLRETKT1020
 1021 SILRKQLSDE SRKDQSRNGE SQTGNRHRSE SDSHNRDMFM EITDSMDELA SPGSHSIRKI1080
 1081 QVEKYYKHSD GDFDEDDTEY SIDSDGDEIV IRTNYPSRAQ ENERYRRQER TYAEPENPVD1140
 1141 RKRPARKSSP TDSQPEAMPR LSRRDSSKRG SRKQTSSEPP HNRVSISKYE STVTENGRKL1200
 1201 MSTSTEIVGS KRSLTDRSYQ SETELAGLEH EERNVPKYME WYYNKKKSSV SGRTSTESSK1260
 1261 SQPSSKKKVG AAEKRVSKTR ITAQPKDVEE YDETGGRYKP EPAPRKSPPK GSRLLKEDRA1320
 1321 LNKQHKPKIE TDTNHPLLQH SEHRFERENA LEVPAAPTKL PHYMYPETPP HAAAGGKESK1380
 1381 SGRESKTSKE AKPKPSPIRE NEVKVSNSKI YVEHRGTGHP TQKQLNASTL EDDHDSGIAM1440
 1441 NSLLNSLGRR NPIAEKKSVF SIAYDDVSRV KKINSGGESP QYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..645] PSI-BLAST 83.045757 W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography
    2 View Details [646..815] deduced N/A No confident structure predictions are available.
    3 View Details [816..894] deduced N/A No confident structure predictions are available.
    4 View Details [895..967] deduced N/A No confident structure predictions are available.
    5 View Details [968..1206] deduced N/A No confident structure predictions are available.
    6 View Details [1207..1356] deduced N/A No confident structure predictions are available.
    7 View Details [1357..1483] MSA 2.160997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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