| Protein: | gi|45552108, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1483 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45552108, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
734.0 | [0..4] | [676..120] |
|
Region A: Residues: [1-645] |
1 11 21 31 41 51
| | | | | |
1 MLISGSRLFS SSAPPLRLSR SYVSRVDENA PHGTALTFVD PYVPRVYDDD TGKNGVFSLT 60
61 LLNNNGTFEI SPNVAERSAG FLIRVRDNSM LDYEQQQSVQ FQILAQELGP ATNLSALVNV 120
121 TVYINDVNDN APVFEQPAYS VELPENMTAG TKVVQVLATD PDSGLGGKVR YTAILGYLNT 180
181 SLNLDAETGL ITVSTNKHGF DREVMPEYHL YVEARDMDGE GNRAQVPLII KLIDVNDETP 240
241 IFDKDLYEFI LTHDLMGFTT TAVIHAEDKD ATAPNNEVRY EIINGNYDNQ FVLDKVTGEL 300
301 TVREKIHLRS KKNAKTRRRR QAGSDDEDTD IFILTARAYD LGVPVRFSTT TIRVYPPESR 360
361 KRSVKFVVPG HNPDKAKTEE TLSALSGGKV YIHNIRPLSP DEPGAKDIPA GNPGIKERSV 420
421 VTATVIYDSS SVVDISEIQQ RLSHHNNSYA IMPQDTSSTD TLTPLQTQYK AENKVLFWLL 480
481 ILLATLVALT ILILLLCCIC SWCPLYGAAT KRIVNISRTE DDVHLVHREM ANGKQTKSVQ 540
541 VAEWMGRRDA WSAEKPPDTR TKPTRWEFHD GREQLDEDVG RGQDIGEGDR RHIQSAEEQQ 600
601 RRVRIKHNRT AKDDLHLNFH NSRTNLINDR DVYMEDVIEN RDLAG
|
| Detection Method: |  |
| Confidence: | 83.045757 |
| Match: | 1q55A |
| Description: | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [646-815] |
1 11 21 31 41 51
| | | | | |
1 DREHITRTRV NRQEYARRKQ YDSEVRHIDD DSMRRHEIDR GSDIDFNTAH NSLKSKRELF 60
61 IKDGNVEILQ LMTRDKTRDG LNLDDDNIYV NVPLKPAGNL SHPQLLMVDN TGKEILMRRF 120
121 IEEQPDGKQI IREHYQIVPG ATYIQSMPNE VQQGSTLKGD TFPLGKSGPN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [816-894] |
1 11 21 31 41 51
| | | | | |
1 SIVYSQLEPE VKVIHTQPVQ AGEGVSLDQQ MQPAVSNQSL THELEHSLKQ QNALLRQILM 60
61 EKEKLENAYT QHEVALETQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [895-967] |
1 11 21 31 41 51
| | | | | |
1 SLPGQSMAIG TQTDCDAGTQ TEGFDGVLDP EISLAKPSRR RARSENDESM SEDGYEYVRF 60
61 NPPNSPEGVY WIK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [968-1206] |
1 11 21 31 41 51
| | | | | |
1 RRRTKKRPRQ PRKRIVMVEE VKRKIRTPIK EEEEVQERKK RVPPKKPLRE TKTSILRKQL 60
61 SDESRKDQSR NGESQTGNRH RSESDSHNRD MFMEITDSMD ELASPGSHSI RKIQVEKYYK 120
121 HSDGDFDEDD TEYSIDSDGD EIVIRTNYPS RAQENERYRR QERTYAEPEN PVDRKRPARK 180
181 SSPTDSQPEA MPRLSRRDSS KRGSRKQTSS EPPHNRVSIS KYESTVTENG RKLMSTSTE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1207-1356] |
1 11 21 31 41 51
| | | | | |
1 IVGSKRSLTD RSYQSETELA GLEHEERNVP KYMEWYYNKK KSSVSGRTST ESSKSQPSSK 60
61 KKVGAAEKRV SKTRITAQPK DVEEYDETGG RYKPEPAPRK SPPKGSRLLK EDRALNKQHK 120
121 PKIETDTNHP LLQHSEHRFE RENALEVPAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1357-1483] |
1 11 21 31 41 51
| | | | | |
1 PTKLPHYMYP ETPPHAAAGG KESKSGRESK TSKEAKPKPS PIRENEVKVS NSKIYVEHRG 60
61 TGHPTQKQLN ASTLEDDHDS GIAMNSLLNS LGRRNPIAEK KSVFSIAYDD VSRVKKINSG 120
121 GESPQYS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
