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Protein Overview: RBSB_ECOLI

General Information:
Name(s) found: RBSB_ECOLI [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • D-ribose-binding periplasmic protein precursor - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMKKLATLV SAVALSATVS ANAMAKDTIA LVVSTLNNPF FVSLKDGAQK EADKLGYNLV  60
   61 VLDSQNNPAK ELANVQDLTV RGTKILLINP TDSDAVGNAV KMANQANIPV ITLDRQATKG 120
  121 EVVSHIASDN VLGGKIAGDY IAKKAGEGAK VIELQGIAGT SAARERGEGF QQAVAAHKFN 180
  181 VLASQPADFD RIKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KSDVMVVGFD 240
  241 GTPDGEKAVN DGKLAATIAQ LPDQIGAKGV ETADKVLKGE KVQAKYPVDL KLVVKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 62.69897 IDENTICAL MUTATIONS AT CORRESPONDING POSITIONS IN TWO HOMOLOGOUS PROTEINS WITH NON-IDENTICAL EFFECTS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pentose transmembrane transporter activity
    		•  2.47679209577816 bayes_pls_golite062009
  • D-ribose transmembrane transporter activity
    		•  2.47679209577816 bayes_pls_golite062009
  • D-ribose-importing ATPase activity
    		•  2.47679209577816 bayes_pls_golite062009
  • monosaccharide-transporting ATPase activity
    		•  2.39566008731161 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  1.15685021131727 bayes_pls_golite062009
  • binding
    		•  1.13059008752468 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  0.53966958074777 bayes_pls_golite062009
  • transporter activity
    		•  0.399752289774857 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.265529619623159 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  0.23981626136031 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.0415259877073471 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle