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Protein Overview: HNR_ECOLI

General Information:
Name(s) found: HNR_ECOLI [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Protein hnr - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQPLVGKQI LIVEDEQVFR SLLDSWFSSL GATTVLAADG VDALELLGGF TPDLMICDIA  60
   61 MPRMNGLKLL EHIRNRGDQT PVLVISATEN MADIAKALRL GVEDVLLKPV KDLNRLREMV 120
  121 FACLYPSMFN SRVEEEERLF RDWDAMVDNP AAAAKLLQEL QPPVQQVISH CRVNYRQLVA 180
  181 ADKPGLVLDI AALSENDLAF YCLDVTRAGH NGVLAALLLR ALFNGLLQEQ LAHQNQRLPE 240
  241 LGALLKQVNH LLRQANLPGQ FPLLVGYYHR ELKNLILVSA GLNATLNTGE HQVQISNGVP 300
  301 LGTLGNAYLN QLSQRCDAWQ CQIWGTGGRL RLMLSAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..337] PSI-BLAST 66.09691 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein histidine kinase activity
    		•  2.35011582062573 bayes_pls_golite062009
  • two-component sensor activity
    		•  2.32303301074957 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
    		•  2.28838869071567 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.69240737024755 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.65296291878002 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.64318297340116 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.64169398852165 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.45919623810582 bayes_pls_golite062009
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • binding
    		•  1.30574971150356 bayes_pls_golite062009
  • ATPase activity
    		•  1.20060977637766 bayes_pls_golite062009
  • transporter activity
    		•  1.14815595550467 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.08141765801535 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.01232806016411 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.92246823619313 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.900561861643259 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.89546790004613 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.89065853471483 bayes_pls_golite062009
  • hydrolase activity
    		•  0.875592967682638 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.8668136831732 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.86536264587818 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.86511385357843 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.530058973650498 bayes_pls_golite062009
  • DNA binding
    		•  0.460315660888175 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.3056113353665 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.30512981340046 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.30259037403175 bayes_pls_golite062009
  • nucleotide binding
    		•  0.28998663538132 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle