YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: OPT7_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..144] FFAS03 1.11 RPB6
2 View Details [145..358] MSA 1.206971 View MSA. No confident structure predictions are available.
3 View Details [359..430] deduced N/A No confident structure predictions are available.
4 View Details [431..585] MSA 1.211992 View MSA. No confident structure predictions are available.
5 View Details [586..766] MSA 3.213994 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transferase activity, transferring phosphorus-containing groups
  • 2.01281538416671 bayes_pls_golite062009
  • binding
  • 1.94407817286887 bayes_pls_golite062009
  • transferase activity
  • 1.60649038965008 bayes_pls_golite062009
  • DNA-directed RNA polymerase activity
  • 1.52156836827301 bayes_pls_golite062009
  • RNA polymerase activity
  • 1.52156836827301 bayes_pls_golite062009
  • catalytic activity
  • 0.853948963582441 bayes_pls_golite062009
  • nucleic acid binding
  • 0.703245359585675 bayes_pls_golite062009
  • DNA binding
  • 0.542083591442061 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.405555358891152 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle