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Protein Overview: AGO4_ARATH

General Information:
Name(s) found: AGO4_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 924 amino acids

    Gene Ontology:
    Cellular Component: Cajal body [IDA]
    nuclear euchromatin [IDA]
    nucleolus [IDA]
    Biological Process: defense response to bacterium, incompatible interaction [IMP]
    [NOT]long-distance posttranscriptional gene silencing [IMP]
    DNA methylation [IMP]
    chromatin silencing [IMP]
    production of siRNA involved in RNA interference [IGI]
    histone H3-K9 methylation [IMP]
    chromatin silencing by small RNA [TAS]
    Molecular Function: nucleic acid binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK  60
   61 GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR PVEQKGVGRK ILDKVHQTYH 120
  121 SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR 180
  181 LRRPNRSKNF RVEISYAAKI PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV 240
  241 RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN 300
  301 QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF 360
  361 ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP LELCALVPLQ RYTKALTTFQ 420
  421 RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM 480
  481 GCGSETFPRN GRWNFNNKEF VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS 540
  541 PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT 600
  601 EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD 660
  661 VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA EMIESLVKKN GTEDDGIIKE 720
  721 LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA 780
  781 QKNHHTKFFQ PTSPENVPPG TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG 840
  841 FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT 900
  901 APGPISVAQL PRLKDNVANS MFFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] MSA 2.185995 View MSA. No confident structure predictions are available.
    2 View Details [100..281] MSA 1.222989 View MSA. No confident structure predictions are available.
    3 View Details [282..480] PSI-BLAST 33.69897 Solution Structure of the Drosophila Argonaute 1 PAZ Domain
    4 View Details [481..924] PSI-BLAST 25.09691 The Structure of a Piwi protein from Archaeoglobus fulgidus.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle