| Protein: | AGO4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 924 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGO4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
888.0 | [0..4] | [923..149] |
|
|
883.0 | [0..39] | [924..25] |
|
|
881.0 | [0..3] | [923..153] |
|
|
877.0 | [0..33] | [923..17] |
|
|
874.0 | [0..48] | [924..37] |
|
|
873.0 | [0..48] | [924..37] |
|
|
870.0 | [0..14] | [923..7] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK 60
61 GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [100-281] |
1 11 21 31 41 51
| | | | | |
1 RPVEQKGVGR KILDKVHQTY HSDLDGKEFA YDGEKTLFTY GALPSNKMDF SVVLEEVSAT 60
61 RANGNGSPNG NESPSDGDRK RLRRPNRSKN FRVEISYAAK IPLQALANAM RGQESENSQE 120
121 AIRVLDIILR QHAARQGCLL VRQSFFHNDP TNCEPVGGNI LGCRGFHSSF RTTQGGMSLN 180
181 MD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-480] |
1 11 21 31 41 51
| | | | | |
1 VTTTMIIKPG PVVDFLIANQ NARDPYSIDW SKAKRTLKNL RVKVSPSGQE FKITGLSDKP 60
61 CREQTFELKK RNPNENGEFE TTEVTVADYF RDTRHIDLQY SADLPCINVG KPKRPTYIPL 120
121 ELCALVPLQR YTKALTTFQR SALVEKSRQK PQERMTVLSK ALKVSNYDAE PLLRSCGISI 180
181 SSNFTQVEGR VLPAPKLKM
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1r4kA |
| Description: | Solution Structure of the Drosophila Argonaute 1 PAZ Domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [481-924] |
1 11 21 31 41 51
| | | | | |
1 GCGSETFPRN GRWNFNNKEF VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS 60
61 PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT 120
121 EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD 180
181 VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA EMIESLVKKN GTEDDGIIKE 240
241 LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA 300
301 QKNHHTKFFQ PTSPENVPPG TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG 360
361 FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT 420
421 APGPISVAQL PRLKDNVANS MFFC
|
| Detection Method: | |
| Confidence: | 25.09691 |
| Match: | 1w9hA |
| Description: | The Structure of a Piwi protein from Archaeoglobus fulgidus. |
Matching Structure (courtesy of the PDB): |
|
