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Protein Overview: PCYOX_ARATH

General Information:
Name(s) found: PCYOX_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Farnesylcysteine lyase OS=Arabidopsis thaliana GN=FLCY PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: farnesyl diphosphate metabolic process [IDA]
    Molecular Function: prenylcysteine oxidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDFPIAISL LFALLSPVLL PCSGDSTGGV EDDSPATVCI VGSGIGGSSV AHFLRNYSVS  60
   61 TGLNQAKILM FERHEIVGGR MRTVTVAGDT FEAGGSILHP KNYHVKDFVE RFNLTVRLPT 120
  121 PIEESSAIGI WDGKRFVVKT FGSGTKFPFL DTIVSWVNDL YLFLRYGLSL LRMSSFIENT 180
  181 VDNFLKYYES LESRPIFDNV EGMLKWSGLY NLTKLTLQEK LSEAQLSPLL VNELVTVITR 240
  241 INYGQSVLIS GLAGAVSLAG SGGGLWSVEG GNWQMAAKLI NHSDVTLHLN EKIESISYLE 300
  301 NHYELKSTKG NSYKCDVTVV ATPLDEVDIQ FSPTISIPKR ELQHTHTTFV RGLLNPGYFG 360
  361 MKSLSDVPAL VGTLEDPLIP FSCISILRKY SKTDMTYKIF TRQPASDSLL DELFSRRTET 420
  421 VRIDWGAYPK YHAPEVFAPF ILDDHHLYYV NAFENAASTM ETSAVAGENI ARLIISRFMT 480
  481 KESLSSSDKR SCSSGLHSDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..500] PSI-BLAST 56.0 Crystal Structure of Protoporphyrinogen IX Oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ion transmembrane transporter activity
    		•  2.36756267774755 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.2351261332841 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.86980382568547 bayes_pls_golite062009
  • transporter activity
    		•  1.29839290134235 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.1548978833875 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07862908893913 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.556967966402473 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.524958704179844 bayes_pls_golite062009
  • binding
    		•  0.484062530748996 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.324948360293767 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.319451945275931 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.122365761346311 bayes_pls_golite062009
  • protein binding
    		•  0.0281459437915129 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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