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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PCYOX_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDFPIAISL LFALLSPVLL PCSGDSTGGV EDDSPATVCI VGSGIGGSSV AHFLRNYSVS  60
   61 TGLNQAKILM FERHEIVGGR MRTVTVAGDT FEAGGSILHP KNYHVKDFVE RFNLTVRLPT 120
  121 PIEESSAIGI WDGKRFVVKT FGSGTKFPFL DTIVSWVNDL YLFLRYGLSL LRMSSFIENT 180
  181 VDNFLKYYES LESRPIFDNV EGMLKWSGLY NLTKLTLQEK LSEAQLSPLL VNELVTVITR 240
  241 INYGQSVLIS GLAGAVSLAG SGGGLWSVEG GNWQMAAKLI NHSDVTLHLN EKIESISYLE 300
  301 NHYELKSTKG NSYKCDVTVV ATPLDEVDIQ FSPTISIPKR ELQHTHTTFV RGLLNPGYFG 360
  361 MKSLSDVPAL VGTLEDPLIP FSCISILRKY SKTDMTYKIF TRQPASDSLL DELFSRRTET 420
  421 VRIDWGAYPK YHAPEVFAPF ILDDHHLYYV NAFENAASTM ETSAVAGENI ARLIISRFMT 480
  481 KESLSSSDKR SCSSGLHSDS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle