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Protein Overview: PTR7_ARATH

General Information:
Name(s) found: PTR7_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Protein NRT1/ PTR FAMILY 6.3 OS=Arabidopsis thaliana GN=NPF6.3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 590 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: nitrate transport [IMP]
    response to nitrate [IMP]
    response to water deprivation [IMP]
    Molecular Function: nitrate transmembrane transporter activity [IMP]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPETKSDD ILLDAWDFQG RPADRSKTGG WASAAMILCI EAVERLTTLG IGVNLVTYLT  60
   61 GTMHLGNATA ANTVTNFLGT SFMLCLLGGF IADTFLGRYL TIAIFAAIQA TGVSILTLST 120
  121 IIPGLRPPRC NPTTSSHCEQ ASGIQLTVLY LALYLTALGT GGVKASVSGF GSDQFDETEP 180
  181 KERSKMTYFF NRFFFCINVG SLLAVTVLVY VQDDVGRKWG YGICAFAIVL ALSVFLAGTN 240
  241 RYRFKKLIGS PMTQVAAVIV AAWRNRKLEL PADPSYLYDV DDIIAAEGSM KGKQKLPHTE 300
  301 QFRSLDKAAI RDQEAGVTSN VFNKWTLSTL TDVEEVKQIV RMLPIWATCI LFWTVHAQLT 360
  361 TLSVAQSETL DRSIGSFEIP PASMAVFYVG GLLLTTAVYD RVAIRLCKKL FNYPHGLRPL 420
  421 QRIGLGLFFG SMAMAVAALV ELKRLRTAHA HGPTVKTLPL GFYLLIPQYL IVGIGEALIY 480
  481 TGQLDFFLRE CPKGMKGMST GLLLSTLALG FFFSSVLVTI VEKFTGKAHP WIADDLNKGR 540
  541 LYNFYWLVAV LVALNFLIFL VFSKWYVYKE KRLAEVGIEL DDEPSIPMGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 5.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [120..590] PSI-BLAST 3.522879 Structure of Recombinant Cytochrome ba3 Oxidase from Thermus thermophilus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  4.2806100513341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.19885907933483 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.84408202866254 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.8040203610363 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.75138450662165 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.70789105655322 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  3.50677244808268 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.31056542061812 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  3.23490160064241 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  2.43885551987643 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  2.04232192418952 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  2.04232192418952 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  2.04232192418952 bayes_pls_golite062009
  • catalytic activity
    		•  1.95966890211023 bayes_pls_golite062009
  • hydrolase activity
    		•  1.80020668269789 bayes_pls_golite062009
  • binding
    		•  0.632960821340123 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.349031670056176 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.243994367285022 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.114666275609784 bayes_pls_golite062009
  • protein binding
    		•  0.0161625430256639 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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