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Protein Overview: syn-1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..306] PSI-BLAST 34.69897 Syntaxin 1A N-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • phosphatidic acid binding
  • 8.51970136264329 bayes_pls_golite062009
  • SNAP receptor activity
  • 3.50393203740159 bayes_pls_golite062009
  • binding
  • 2.33192450173199 bayes_pls_golite062009
  • calcium-dependent protein binding
  • 1.88288628726104 bayes_pls_golite062009
  • transporter activity
  • 1.74189664015129 bayes_pls_golite062009
  • protein binding
  • 1.61683263008775 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.49085442233849 bayes_pls_golite062009
  • protein transporter activity
  • 1.29100730674261 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.13101548288086 bayes_pls_golite062009
  • excitatory extracellular ligand-gated ion channel activity
  • 0.86350507004267 bayes_pls_golite062009
  • extracellular ligand-gated ion channel activity
  • 0.86350507004267 bayes_pls_golite062009
  • SNARE binding
  • 0.71459772253941 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.643064875848901 bayes_pls_golite062009
  • gated channel activity
  • 0.621670335227137 bayes_pls_golite062009
  • ligand-gated ion channel activity
  • 0.41937155561589 bayes_pls_golite062009
  • ligand-gated channel activity
  • 0.41937155561589 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.370484918396857 bayes_pls_golite062009
  • channel activity
  • 0.0647076360772156 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.0647076360772156 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.0435980899803177 bayes_pls_golite062009
  • phospholipid binding
  • 0.0172309833091902 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle