General Information: |
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Name(s) found: |
ttb-1 /
CE27396
[WormBase]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Caenorhabditis elegans |
Length: | 306 amino acids |
Gene Ontology: |
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Cellular Component: |
transcription factor complex
[IEA]
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Biological Process: |
embryonic development ending in birth or egg hatching
[IMP]
regulation of transcription, DNA-dependent [IEA] transcription initiation [IEA] regulation of transcription [IEA] |
Molecular Function: |
zinc ion binding
[IEA]
transcription regulator activity [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSAPVQCPIH PDVHLIEDHR AGDLVCPACG LVVGDRLVDV GTEWRSFSNE RSGNDPSRVG 60 61 APENPLLSGG DLSTTIAVGF GGSDSDNSLA NAQRKSMNNT DRQMTAAMSL IREMSERIHL 120 121 PRNIQDSASR IFKDVLESKA LRGKNNEAQA AACLYIACRK DGVPRTFKEI CAVSRVSKKE 180 181 IGRCFKIIVR SLETNLEQIT SADFMSRFCG NLSLPNSIQA AATRIAKCAV DMDLVAGRTP 240 241 ISIAAAAIYM ASQASAEKRS AKEIGDVAGA AEITVRQTYK LLYPKALELF PKDFRFVTPI 300 301 DALPNS |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..70] | 3.1 | RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc bound structures) | |
2 | View Details | [71..306] | 39.69897 | Transcription factor IIB (TFIIB), core domain |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)