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Protein Overview: CE01076

General Information:
Name(s) found: CE01076 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011409 status:Confirmed UniProt:Q22137 protein_id:CAA84727.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 681 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    glycogen biosynthetic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    trehalose biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: 1,4-alpha-glucan branching enzyme activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    cation binding [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNTRPPKID ELLKIDPYLH DFQDEISRRY GVFLDYQRRI EECGGMEEFT SSYKQFGLNV  60
   61 QPDNSVKGLE WAPAAEKLAL IGDFNNWDQN ANVYKKEEHG KWSITVPAKE DGSCPIPHNS 120
  121 VIKIAVSRHG ATHFKLSPWA TFVTCPNPKE TVIYHQNFWN PPEKYQLKEA RPARPASLRI 180
  181 YEAHVGISSS EGKINTYREF ADDVLPRIQK QGYNAIQLMA VMEHVYYASF GYQVSNFFAV 240
  241 SSRCGTPEDL KYLVDKAHSL GIFMLLDVVH SHASKNVEDG LNQWDGSNGG YFHDNARGYH 300
  301 NLWDSRLFDY TQTETLRFLL SNVRWWVEEY GFDGFRFDGV SSMIYHSHGM NDDFCGGYPM 360
  361 YFGLNADTDS LVYLMLANDF LHKKYPFMIT IAEEVSGMPG ICRPVEEGGQ GFDYRLAMAL 420
  421 PDMWIKILKH TSDEDWKIDD IVFNLENRRY AEKHVAYAES HDQALVGDKT IAFWLMDKEM 480
  481 YDFMSTDSPL TPIIDRGLSL HKLIRLITIG LGGEAWLNFI GNEFGHPEWL DFPRVGNGES 540
  541 FHYARRQFNL VDAEYLRYKF LNNWDREMML LEERTGFLHK GYAYTSWKHD GDKTIVFERG 600
  601 GLVFVINLHP TKSFADYSIG VNTPGRYRIA LNSDESKFGG HNRIDNSIKF HTTDDGYAGR 660
  661 RHRLQVYITC RTAIVLEKED D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..681] PSI-BLAST 121.0 1,4-alpha-glucan branching enzyme, N-terminal domain N; 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching enzyme, central domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.87554479203059 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.47174391073813 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.99159540154441 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.687079660016821 bayes_pls_golite062009
  • sugar binding
    		•  0.52048704356718 bayes_pls_golite062009
  • chitinase activity
    		•  0.500233744020165 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.498330151821515 bayes_pls_golite062009
  • binding
    		•  0.391406996198514 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.31275257729319 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009
  • hydrolase activity
    		•  0.15436539680525 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.0325030313870961 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.0325030313870961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle