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Protein Overview: mig-10

General Information:
Name(s) found: mig-10 / CE00150 [WormBase]
Description(s) found:
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  • WBGene00003243 locus:mig-10 Abnormal cell migration protein 10 status:Confirmed UniProt:P34400 protein_id:CCD69133.1 [WormBase]
  • gi|71984364|ref|NP_498821.2| abnormal cell MIGration family member (mig-10) [Caenorhabditis elegans] [NCBI NR]
  • pir||S44806 F10E9.6 protein - Caenorhabditis elegans [NCBI NR]
  • ref|NP_498822.1| abnormal cell MIGration MIG-10, amyloid beta protein-binding family B member 1 interacting protein like (73.3 kD) (mig-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|156297|gb|AAA28018.1| Abnormal cell migration protein 10, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE00150 WBGene00003243 locus:mig-10 status:Confirmed SW:P34400 protein_id:AAA28018.1 [wormpep150.fasta]
  • 00150 WBGene00003243 locus:mig-10 status:Confirmed SW:P34400 protein_id:AAA28018.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • abnormal cell MIGration MIG-10, amyloid beta protein-binding family B member 1 interacting protein like (73.3 kD) (mig-10) [Caenorhabditis elegans]gi|156297|gb|AAA28018.1| Abnormal cell migration protein 10, isoform b [Caenorhabditis elegans]gi|630608|p [nrdb_11152004_Chlamydomonas]
  • locus:mig-10 status:Confirmed SW:P34400 protein_id:AAK84523.2 [wormpep115.fasta.reversed]
  • CE00150 locus:mig-10 status:Confirmed [wormpep80.hongbin]
  • CE00150 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:AAA28018.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00150 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:AAA28018.1| [wormORF-contam.fasta]
  • Abnormal cell migration protein 10, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • abnormal cell MIGration family member (mig-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00150 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:CCD69133.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE00150 WBGene00003243 locus:mig-10 status:Confirmed UniProt:P34400 protein_id:CCD69133.1 Abnormal cell migration protein 10 [wormpep246-ecoli-contam.fasta]
  • Isoform of P34400, Isoform b of Abnormal cell migration protein 10 OS=Caenorhabditis elegans GN=mig-10 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 650 amino acids

    Gene Ontology:
    Cellular Component: filamentous actin [IDALink to PubMed article]
    Biological Process: tail morphogenesis [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    neuron migration [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    mesodermal cell migration [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    signal transduction [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed articleLink to PubMed article]
    regulation of cell migration [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHDRRRTGF RQYETYMKQK QSADWQLDEL LEELEALETQ LNSSNGGDQL LLGVSGIPAS  60
   61 SSRENVKSIS TLPPPPPALS YHQTPQQPQL LHHHNNHLGY QNGIHQITSI NSAASSCSSP 120
  121 DGDSAFGDSS STESSNNRCR NSAFSSNDSC RDSLNTPSPT QVSPRNGELN AEEAKAQKIR 180
  181 QALEKMKEAK VTKIFVKFFV EDGEALQLLI DERWTVADTL KQLAEKNHIA LMEDHCIVEE 240
  241 YPELYIKRVY EDHEKVVENI QMWVQDSPNK LYFMRRPDKY AFISRPELYL LTPKTSDHME 300
  301 IPSGDQWTID VKQKFVSEYF HREPVVPPEM EGFLYLKSDG RKSWKKHYFV LRPSGLYYAP 360
  361 KSKKPTTKDL TCLMNLHSNQ VYTGIGWEKK YKSPTPWCIS IKLTALQMKR SQFIKYICAE 420
  421 DEMTFKKWLV ALRIAKNGAE LLENYERACQ IRRETLGPAS SMSAASSSTA ISEVPHSLSH 480
  481 HQRTPSVASS IQLSSHMMNN PTHPLSVNVR NQSPASFSVN SCQQSHPSRT SAKLEIQYDE 540
  541 QPTGTIKRAP LDVLRRVSRA STSSPTIPQE ESDSDEEFPA PPPVASVMRM PPPVTPPKPC 600
  601 TPLTSKKAPP PPPKRSDTTK LQSASPMAPA KNDLEAALAR RREKMATMEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] MSA 2.04498 View MSA. No confident structure predictions are available.
    2 View Details [166..303] PSI-BLAST 32.69897 Solution Structure of the RA Domain of Human Grb7 Protein
    3 View Details [304..450] PSI-BLAST 14.0 No description for 2yryA was found.
    4 View Details [451..548] deduced N/A No confident structure predictions are available.
    5 View Details [549..650] PSI-BLAST 4.69897 Solution structure of the human Grb7-SH2 domain in complex with a 10 amino acid peptide pY1139

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0934358341245259 bayes_pls_golite062009
  • protein binding
    		•  0.03789551947602 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle