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Protein Overview: cfr1

General Information:
Name(s) found: cfr1 / SPAC6G9.12 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Chs five related protein Cfr1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 620 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: [NOT]glucan biosynthetic process [IMPLink to PubMed article]
    cell wall macromolecule catabolic process involved in cytogamy [IGILink to PubMed article][IMPLink to PubMed article]
    [NOT]chitin biosynthetic process [IMPLink to PubMed article]
    plasma membrane fusion during cytogamy [IMPLink to PubMed article]
    Golgi to plasma membrane transport [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDTNQFMVS VAKIDAGMAI LLTPSFHIIE FPSVLLPNDA TAGSIIDISV HHNKEEEIAR  60
   61 ETAFDDVQKE IFETYGQKLP SPPVLKLKNA TQTSIVLEWD PLQLSTARLK SLCLYRNNVR 120
  121 VLNISNPMTT HNAKLSGLSL DTEYDFSLVL DTTAGTFPSK HITIKTLRMI DLTGIQVCVG 180
  181 NMVPNEMEAL QKCIERIHAR PIQTSVRIDT THFICSSTGG PEYEKAKAAN IPILGLDYLL 240
  241 KCESEGRLVN VSGFYIENRA SYNANASINS VEAAQNAAPN LNATTEQPKN TAEVAQGAAS 300
  301 AKAPQQTTQQ GTQNSANAEP SSSASVPAEA PETEAEQSID VSSDIGLRSD SSKPNEAPTS 360
  361 SENIKADQPE NSTKQENPEE DMQIKDAEEH SNLESTPAAQ QTSEVEANNH QEKPSSLPAV 420
  421 EQINVNEENN TPETEGLEDE KEENNTAAES LINQEETTSG EAVTKSTVES SANEEEAEPN 480
  481 EIIEENAVKS LLNQEGPATN EEVEKNNANS ENANGLTDEK IIEAPLDTKE NSDDDKPSPA 540
  541 AAEDIGTNGA IEEIPQVSEV LEPEKAHTTN LQLNALDKEE DLNITTVKQS SEPTADDNLI 600
  601 PNKEAEIIQS SDEFESVNID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] FFAS03 1.07 The eighth FN3 domain of human sidekick-2
    2 View Details [173..298] FFAS03 1.41 No description for 2d8mA was found.
    3 View Details [299..416] MSA 4.254996 View MSA. No confident structure predictions are available.
    4 View Details [417..620] MSA 2.254996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.42181781846337 bayes_pls_golite062009
  • binding
    		•  1.91252838098228 bayes_pls_golite062009
  • receptor activity
    		•  0.36292763239647 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.239312512917867 bayes_pls_golite062009
  • cytokine binding
    		•  0.23854252705133 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle