General Information: |
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Name(s) found: |
chp1 /
SPAC18G6.02c
[Sanger Pombe]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Schizosaccharomyces pombe |
Length: | 960 amino acids |
Gene Ontology: |
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Cellular Component: |
mating-type region heterochromatin
[IDA]
nucleus [IDA] nuclear telomeric heterochromatin [IDA] RITS complex [IDA] spindle pole body [IDA] chromosome, centromeric region [IDA] centromeric heterochromatin [IDA] |
Biological Process: |
regulation of histone methylation
[IMP]
chromatin remodeling [RCA] chromatin silencing at centromere [TAS] mitotic sister chromatid segregation [IGI][IMP] chromatin assembly or disassembly [IEA] [NOT]chromatin silencing at silent mating-type cassette [IMP] [NOT]chromatin silencing at telomere [IMP] cellular protein localization [IGI] chromatin silencing by small RNA [IGI][IMP] |
Molecular Function: |
DNA binding
[IEA]
protein binding [IPI] RNA binding [RCA] chromatin binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MVSVKPLPDI DSNEGETDAD VYEVEDILAD RVNKNGINEY YIKWAGYDWY DNTWEPEQNL 60 61 FGAEKVLKKW KKRKKLIAKG LLEPFDAEDN EAKKMKREKE ILRQQRQKRK SELTQLSQKV 120 121 KEKFKKMRKK PARRIVTIAN DEEEEDDQTM DEDAFERKSM QGELKERNLT DKTSTLSTSF 180 181 GETSPDVNPF YLSEWPTVTD SILLSKSLSS DAIPLKNGEI KSTMLMPSDS DNSVPGIQNS 240 241 NNLENTGAFV ENANSPQSNT PLSTFRHSSP LSLSPVITSD NDVANSLFFS NSTPLPSSLK 300 301 IKKEAPKLET HTILVSDNSG SLTKQDILSY FAFIKGNIEV FFLKSPKKDK VCNMAYIQFD 360 361 SIEQAKLAYD KGHPSWHVTL VKGKISTDME ECKVSKSILK TTPSKKANAR SVSFTQTTTD 420 421 TLSESEKFAS NVDLDENFDF NVNVTNEDAK QLKKSVIGSS WTTVNNDWNS VSKSDQTFEN 480 481 DGASKVVPAG NITLNSDNSL HHSISESEDL SSASTLSDYF RFVLRVGKSL YYAGELSFDI 540 541 SKLKAETEHQ QLLRSLVSCK QVDVLRFVTS QYLEVFGTCL TKVLSGSLCI RSDVDMTHFK 600 601 NILNRGNGAG IVLGSNYTLL LFTEDNNALM NLYDCQGQSN SPFWMVIFEP LESILVEWSA 660 661 KNLRPKKPYH KSQSYLSYLL QLGHIDLHKI GAFQATQILI VSKQPSPEAE ELEDTFREAA 720 721 IPTFRGLEIP ESLFLSQNVF VFLNVSLEDD FDQLQFLTLA KRKSCKFFLF GLSLPLKSPN 780 781 DSHVGTDFKK NNEPLDKLTY SQYLRPMFPK GGVVSVTLSA LIKTPRLLEL ISPFLEIKKD 840 841 SWILILPPSI VDMVKSYFVT NNPDKSLLEI QNLLNTLQRY LTNPALKNVT LYQDWDIVID 900 901 DSADVSLAST LQLYQKKNYD KYRRFVLIHE LKNELTPVNG LDIVDYDEFK ETFMRAIGLK 960 961 |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..183] | 14.69897 | Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2 | |
2 | View Details | [184..434] | N/A | No confident structure predictions are available. | |
3 | View Details | [435..586] | 8.147994 | View MSA. No confident structure predictions are available. | |
4 | View Details | [587..779] | N/A | No confident structure predictions are available. | |
5 | View Details | [780..960] | N/A | No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)