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Protein Overview: orb-PD, orb-PB

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..78] MSA 1.004976 View MSA. No confident structure predictions are available.
2 View Details [79..164] FFAS03 1.0 No description for 2ihxB was found.
3 View Details [165..256] deduced N/A No confident structure predictions are available.
4 View Details [257..443] MSA 1.180993 View MSA. No confident structure predictions are available.
5 View Details [444..557] deduced N/A No confident structure predictions are available.
6 View Details [558..782] PSI-BLAST 52.154902 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
7 View Details [783..913] PSI-BLAST 7.045757 poly(A) binding protein

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5 No functions predicted.
6
Term Confidence Notes
  • RNA binding
  • 4.63987691433124 bayes_pls_golite062009
  • nucleic acid binding
  • 3.64594243387558 bayes_pls_golite062009
  • mRNA binding
  • 3.54495985180603 bayes_pls_golite062009
  • binding
  • 3.00411894202318 bayes_pls_golite062009
  • protein binding
  • 2.17260848225967 bayes_pls_golite062009
  • 1.71820051628117 bayes_pls_golite062009
  • single-stranded RNA binding
  • 1.46469774223879 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.862661444935922 bayes_pls_golite062009
  • transcription regulator activity
  • 0.737458867828906 bayes_pls_golite062009
  • DNA binding
  • 0.691258294213766 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.599389001184667 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.366758605553422 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • transcription activator activity
  • 0.119266921032347 bayes_pls_golite062009
  • structural molecule activity
  • 0.0829058000493267 bayes_pls_golite062009
    7 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle